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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs13033012 chr2:99795149 T/C TSGA10 chr2:99613724-99771427:- 0.57 5.58 8.74E-7 Box Plot
ACC rs13035357 chr2:99752246 C/T TSGA10 chr2:99613724-99771427:- 0.57 5.64 7.06E-7 Box Plot
ACC rs13039026 chr20:44364626 T/C WFDC3 chr20:44376583-44420571:- 0.86 6.08 1.46E-7 Box Plot
ACC rs13043770 chr20:44364549 C/T WFDC3 chr20:44376583-44420571:- 0.82 5.79 4.09E-7 Box Plot
ACC rs13044555 chr20:44364614 A/G WFDC3 chr20:44376583-44420571:- 0.86 6.08 1.46E-7 Box Plot
ACC rs13111710 chr4:76859705 C/G NAAA chr4:76834810-76862204:- 0.55 5.69 5.96E-7 Box Plot
ACC rs13125558 chr4:76852585 A/C NAAA chr4:76834810-76862204:- 0.52 5.59 8.57E-7 Box Plot
ACC rs13126007 chr4:76862255 G/A NAAA chr4:76834810-76862204:- 0.52 5.36 1.97E-6 Box Plot
ACC rs13132564 chr4:76883281 T/A NAAA chr4:76834810-76862204:- 0.52 5.3 2.4E-6 Box Plot
ACC rs13170029 chr5:96279053 C/T ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs13226855 chr7:64433703 T/C INTS4L1 chr7:64601603-64694600:+ 0.71 5.22 3.18E-6 Box Plot
ACC rs13229762 chr7:64484439 G/A INTS4L1 chr7:64601603-64694600:+ 0.69 5.07 5.47E-6 Box Plot
ACC rs13230541 chr7:97473283 C/T TECPR1 chr7:97843936-97881563:- 0.7 5.24 2.94E-6 Box Plot
ACC rs13231214 chr7:97463200 A/G TECPR1 chr7:97843936-97881563:- 0.7 5.28 2.53E-6 Box Plot
ACC rs13232045 chr7:97403655 C/T TECPR1 chr7:97843936-97881563:- 0.72 5.44 1.45E-6 Box Plot